PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16082.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

HSF

Protein Properties

Length: 598aa MW: 66030.5 Da PI: 4.5156

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16082.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	76.8	3.8e-24	34	92	2	60
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+ye+++d++++ ++sw +nsfvv+++ +fa+++LpkyFkh+nf+SFvRQLn+Y RWW16082.1 34 FLSKTYEMVDDPATDAIVSWGPANNSFVVWNTIDFARDLLPKYFKHNNFSSFVRQLNTY 92 9******************999********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 598 aa Download sequence
MNGEGGDADG APASASTVAT TANAGLNGGA PPPFLSKTYE MVDDPATDAI VSWGPANNSF 60 VVWNTIDFAR DLLPKYFKHN NFSSFVRQLN TYVRLFLCIH NLLVFLYNTA AFGDGIGTEC 120 EGSIGVGREH GAVGHEFDLA DQFRTLFNPV MDCEKGSSLL LLEPGHEIDL DDDVATTGFR 180 KVDPDRWEFA NEGFLRGQKH LLKAISRRKS THGHNQQPQQ QQQQQQQQQQ PQTQNTIEVG 240 KFGLEEEIER LKRDKNVLMQ ELVRLRQQQQ TTDQQLNTLG QRLQGMEQRQ QQMMSFLAKA 300 MQSPGFLAQL VQQNDNNRRI VGESKKRRLP RQENELDGES TMQDGQIIKY QPLINEAAKA 360 MLMQILKFDT SPRLESFGNS QNFLFENYSS PLEAFDSSSL KRISGVTLSE VPPTSSGVPS 420 LPASSGYSAM PPPCVPSEIQ SSSNVAHMVT TTKMPNMDLR SATIAPSHTN NGMSELSQVQ 480 SMMPDRFSHS YVGSNGGSIP MNPISNVMDE LAGIETENFT SDTDMDVLSD DEQLPSINDP 540 FWEQFLTASP LLGDAGEVDS GIHETEEIGL EAGNSGDSTQ SMDHLTMQMG HLAPNSNW

Sequence ? help Back to Top

Protein Sequence Length: 598 aa Download sequence

MNGEGGDADG APASASTVAT TANAGLNGGA PPPFLSKTYE MVDDPATDAI VSWGPANNSF  60
VVWNTIDFAR DLLPKYFKHN NFSSFVRQLN TYVRLFLCIH NLLVFLYNTA AFGDGIGTEC  120
EGSIGVGREH GAVGHEFDLA DQFRTLFNPV MDCEKGSSLL LLEPGHEIDL DDDVATTGFR  180
KVDPDRWEFA NEGFLRGQKH LLKAISRRKS THGHNQQPQQ QQQQQQQQQQ PQTQNTIEVG  240
KFGLEEEIER LKRDKNVLMQ ELVRLRQQQQ TTDQQLNTLG QRLQGMEQRQ QQMMSFLAKA  300
MQSPGFLAQL VQQNDNNRRI VGESKKRRLP RQENELDGES TMQDGQIIKY QPLINEAAKA  360
MLMQILKFDT SPRLESFGNS QNFLFENYSS PLEAFDSSSL KRISGVTLSE VPPTSSGVPS  420
LPASSGYSAM PPPCVPSEIQ SSSNVAHMVT TTKMPNMDLR SATIAPSHTN NGMSELSQVQ  480
SMMPDRFSHS YVGSNGGSIP MNPISNVMDE LAGIETENFT SDTDMDVLSD DEQLPSINDP  540
FWEQFLTASP LLGDAGEVDS GIHETEEIGL EAGNSGDSTQ SMDHLTMQMG HLAPNSNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	7e-65	HSF family protein