PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW16040.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 396aa MW: 44675.1 Da PI: 7.3046

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW16040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.4	4.3e-53	171	274	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdf+nh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa++rtd+fdfl+div RWW16040.1 171 QLQMFWADQyreIEQTTDFRNHSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAISRTDVFDFLIDIV 269 89***99999*********************************************************************************** PP NF-YC 97 prdel 101 pr+e RWW16040.1 270 PREEG 274 985 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDPGLVYDLT TTDYLNFLCG LGYNSTQLAE FSSYSCPSKP PRIKDLNYPS ITIPDLSSST 60 KVTRVVKNVG SPGTYPVGVI EPRGISVTVS PANLTFDEVG EEKKFEVTLK KKMKEGESSA 120 EYAFGRLIWT DRKHYVRTPL PGHPVPPMIG VPPGVPYQAY QNLYQQQQQQ QLQMFWADQY 180 REIEQTTDFR NHSLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRSWAHAE 240 ENKRRTLQKN DIAAAISRTD VFDFLIDIVP REEGKEDVAH ALGGPPVDPL SYYYVKSNMH 300 EIPFCHQELG CISGEQRKLV AWATDQFDGS RIESRKTVLP VEPNRVGLVL LRLIAEGVIS 360 SFLVAGDRRS KSILRHHGRL IYFFALTPPV SEIAAF

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDPGLVYDLT TTDYLNFLCG LGYNSTQLAE FSSYSCPSKP PRIKDLNYPS ITIPDLSSST  60
KVTRVVKNVG SPGTYPVGVI EPRGISVTVS PANLTFDEVG EEKKFEVTLK KKMKEGESSA  120
EYAFGRLIWT DRKHYVRTPL PGHPVPPMIG VPPGVPYQAY QNLYQQQQQQ QLQMFWADQY  180
REIEQTTDFR NHSLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRSWAHAE  240
ENKRRTLQKN DIAAAISRTD VFDFLIDIVP REEGKEDVAH ALGGPPVDPL SYYYVKSNMH  300
EIPFCHQELG CISGEQRKLV AWATDQFDGS RIESRKTVLP VEPNRVGLVL LRLIAEGVIS  360
SFLVAGDRRS KSILRHHGRL IYFFALTPPV SEIAAF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	244	250	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	6e-61	NF-YC family protein