PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW16028.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB
Protein Properties Length: 255aa    MW: 28953.6 Da    PI: 8.315
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW16028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.34.8e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g W+++Ed++l d++ q+G  +W++++++ g+ R +k+c++rw +yl
       RWW16028.1 15 KGLWSPDEDQKLRDYILQHGVSCWSAVPAKAGLQRNGKSCRLRWINYL 62
                     678*******************************************97 PP

2Myb_DNA-binding568.8e-1868113148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++++eE+e +v++  +lG++ W+ Ia +++ gRt++++k+ w++yl
       RWW16028.1  68 RGNFSPEEEETIVKLQSKLGNK-WSQIAMHLP-GRTDNEVKNQWNSYL 113
                      89********************.*********.*************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MECKNCKKPE VDCRKGLWSP DEDQKLRDYI LQHGVSCWSA VPAKAGLQRN GKSCRLRWIN  60
YLRPGLKRGN FSPEEEETIV KLQSKLGNKW SQIAMHLPGR TDNEVKNQWN SYLKKKIIKP  120
QELDTSISAS SALNLIIQRI TMHKTEKDHV VPSAAGRYTE ALESCLKNYD QSVTQNIGGG  180
SPNRTAADQF SNVLFPDCLS FEQANWDSLF NLDDAISNQW HCKNFYTASQ VDAQYGNNVI  240
VPNGFRFTNT CGQFE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.12e-55MYB family protein