PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW16028.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 255aa MW: 28953.6 Da PI: 8.315 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.3 | 4.8e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l d++ q+G +W++++++ g+ R +k+c++rw +yl RWW16028.1 15 KGLWSPDEDQKLRDYILQHGVSCWSAVPAKAGLQRNGKSCRLRWINYL 62 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 56 | 8.8e-18 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +v++ +lG++ W+ Ia +++ gRt++++k+ w++yl RWW16028.1 68 RGNFSPEEEETIVKLQSKLGNK-WSQIAMHLP-GRTDNEVKNQWNSYL 113 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MECKNCKKPE VDCRKGLWSP DEDQKLRDYI LQHGVSCWSA VPAKAGLQRN GKSCRLRWIN 60 YLRPGLKRGN FSPEEEETIV KLQSKLGNKW SQIAMHLPGR TDNEVKNQWN SYLKKKIIKP 120 QELDTSISAS SALNLIIQRI TMHKTEKDHV VPSAAGRYTE ALESCLKNYD QSVTQNIGGG 180 SPNRTAADQF SNVLFPDCLS FEQANWDSLF NLDDAISNQW HCKNFYTASQ VDAQYGNNVI 240 VPNGFRFTNT CGQFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 2e-55 | MYB family protein |