PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15829.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB_related | ||||||||
Protein Properties | Length: 222aa MW: 24516.6 Da PI: 5.1448 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.7 | 5.7e-08 | 39 | 63 | 23 | 48 |
-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48 +W++Ia++++ gRt++++k+ w+++l RWW15829.1 39 RWSAIAAKLP-GRTDNEIKNVWHTHL 63 6*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MRGSGTGTAG TSIPKQKKKY EFWFRPWSLI PVSFLLVDRW SAIAAKLPGR TDNEIKNVWH 60 THLKKLVGPN MASKDSQRKT PHRSMVKKKK VSPETGHDTA KLVSVSPEQS YSDFSSCATD 120 SSTASAEISD SAEGAKEESC LAEELREIDE KFWLETLAMD DSAASMDIIT TLEISPPPPP 180 PPPPAAAVTD HFNLLSSSNG DDMDFWMEIF MRSGDLQELS QI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.2 | 3e-19 | MYB_related family protein |