PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15677.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 929aa MW: 100750 Da PI: 5.7472

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15677.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28	5.1e-09	4	45	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +W+++E +++ + +++G++ +++I++ ++ ++t +c+++++k RWW15677.1 4 PWSQDEKDIFMEMLARYGKD-FTKISSSLN-HKTTADCIEFYYK 45 8***************99.*****.*********98 PP
2	Myb_DNA-binding	28.7	3.1e-09	216	255	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT eE ++++a +G++ +++I+++m +R+ +qck ++ RWW15677.1 216 WTDEEKSIFIQALGTYGKD-FTKISSCMK-TRSWEQCKIFFS 255 ***************99.****9.******8775 PP

Sequence ? help Back to Top
Protein Sequence Length: 929 aa Download sequence
MINPWSQDEK DIFMEMLARY GKDFTKISSS LNHKTTADCI EFYYKNHKSE SFKEVKKWLD 60 LRKQQQQCLP ANTYLVASGK KWNHEMNASS LDMLGAASTV VAHDHRSSKS EKYAGSAVYE 120 TCNDMKVSYG SSYLEGENSV DVSGPERDFV AADVLAGICG ALSSETMSSC VTSFIHPAER 180 INRITMDQLL TPEVTQNLDE EEACSDEGCE LGSADWTDEE KSIFIQALGT YGKDFTKISS 240 CMKTRSWEQC KIFFSKARKC LGLDVIRQGT VLGGTPLSDA NGARSDTDDA CVAEMDSAIC 300 STQSCSKVDV DVSQSVANTS YEGIAHAAGN PFHVGTDRSN EQDGDVFLGP NLVDGDEKVN 360 NEKVSIFHDD KLASQGDNLQ SNTRQKENIA AGLGCAEAIQ LCEVADSVDR ETKVGGITNV 420 VSPNVSVLTI GKTEPVVEAC LEVESTKSAA STVCNVDATG RSPAEGLKVV VKTEASLSSE 480 VGLSNKKMTN INLTANGKGL LCCGPDSNAS AVALFSGTVA NVCHHLAFDP KYQQQIQLDL 540 QQRKLKQPQA ILLKQENLHP VPLNSLLPDP SSICFGGTLD VSSETTLNFE QGNKWHQNLV 600 KRGIYKQYMP RKLSVNQVDR NMHILRGYPL QALSQDVKRE VDLTAGEKPN LLEGECKKNV 660 VPQSNPFFMS DKHWNKNNLP PSNSGILCSS RSENQSEAEF RTCTKNASSE IEEHRTGDVK 720 LFGKILSHMS PLPQSSSSSH ESNPRTSPEL DGSSTTNCAS FRRNNNRLVP NAGNGQVGLE 780 ALPVRTYGFW DGKRIQTGFS SLPETAAMLA KYQGSLTGVS LYSAKDGMPS GNGVLTDYQQ 840 SYIQHLSSNG KRVENISELQ KRNGGIEMVS GFQQQGRVAP LGANVMGGIL VGGGAGGVSD 900 PVAALKMHYA ARASALNNIE AWRADMGDR

Sequence ? help Back to Top

Protein Sequence Length: 929 aa Download sequence

MINPWSQDEK DIFMEMLARY GKDFTKISSS LNHKTTADCI EFYYKNHKSE SFKEVKKWLD  60
LRKQQQQCLP ANTYLVASGK KWNHEMNASS LDMLGAASTV VAHDHRSSKS EKYAGSAVYE  120
TCNDMKVSYG SSYLEGENSV DVSGPERDFV AADVLAGICG ALSSETMSSC VTSFIHPAER  180
INRITMDQLL TPEVTQNLDE EEACSDEGCE LGSADWTDEE KSIFIQALGT YGKDFTKISS  240
CMKTRSWEQC KIFFSKARKC LGLDVIRQGT VLGGTPLSDA NGARSDTDDA CVAEMDSAIC  300
STQSCSKVDV DVSQSVANTS YEGIAHAAGN PFHVGTDRSN EQDGDVFLGP NLVDGDEKVN  360
NEKVSIFHDD KLASQGDNLQ SNTRQKENIA AGLGCAEAIQ LCEVADSVDR ETKVGGITNV  420
VSPNVSVLTI GKTEPVVEAC LEVESTKSAA STVCNVDATG RSPAEGLKVV VKTEASLSSE  480
VGLSNKKMTN INLTANGKGL LCCGPDSNAS AVALFSGTVA NVCHHLAFDP KYQQQIQLDL  540
QQRKLKQPQA ILLKQENLHP VPLNSLLPDP SSICFGGTLD VSSETTLNFE QGNKWHQNLV  600
KRGIYKQYMP RKLSVNQVDR NMHILRGYPL QALSQDVKRE VDLTAGEKPN LLEGECKKNV  660
VPQSNPFFMS DKHWNKNNLP PSNSGILCSS RSENQSEAEF RTCTKNASSE IEEHRTGDVK  720
LFGKILSHMS PLPQSSSSSH ESNPRTSPEL DGSSTTNCAS FRRNNNRLVP NAGNGQVGLE  780
ALPVRTYGFW DGKRIQTGFS SLPETAAMLA KYQGSLTGVS LYSAKDGMPS GNGVLTDYQQ  840
SYIQHLSSNG KRVENISELQ KRNGGIEMVS GFQQQGRVAP LGANVMGGIL VGGGAGGVSD  900
PVAALKMHYA ARASALNNIE AWRADMGDR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	9e-62	MYB family protein