PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15662.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | SBP | ||||||||
Protein Properties | Length: 199aa MW: 21742.2 Da PI: 8.7078 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 93.1 | 2.8e-29 | 50 | 135 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEE.E........-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqr.f........CqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+++C+adl eak+yhrrhkvCe+h ka+vv+v+gl+q f C C rfhel efD++krsCrrrLa+hnerrrk+++ RWW15662.1 50 CCQADDCAADLREAKRYHRRHKVCEAHFKAAVVAVAGLRQSnFlrlslvivCAVC-RFHELAEFDDSKRSCRRRLAGHNERRRKSST 135 6************************************998433222333335555.****************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MKEAAVSRTQ VATLGEDEDK KRRVSFSSSA AARTGPDAGG GGVGGASQPC CQADDCAADL 60 REAKRYHRRH KVCEAHFKAA VVAVAGLRQS NFLRLSLVIV CAVCRFHELA EFDDSKRSCR 120 RRLAGHNERR RKSSTDTQPE GSNSYRQADL PGNPDFSSIS RSDKNLITSF EARSLSSVMP 180 WLPSPPSNIS FLHDTSEDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 7e-31 | SBP family protein |