PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW15617.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

SRS

Protein Properties

Length: 391aa MW: 40007.1 Da PI: 7.2336

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW15617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	204.3	3.4e-63	185	339	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 +g+++CqdCGnqakkdC+h+RCRtCCksrgf+C+thvkstWvpa++rrer+ ++a++ + +++ask++r +++ +++s+t++s+++++++++ RWW15617.1 185 VGESTCQDCGNQAKKDCSHRRCRTCCKSRGFECSTHVKSTWVPASRRRERHVAAASSFA------STSASKKPRLA-ASQPATASHTSTSNTTPPRSFD 276 6889*******************************************9776666544......44567777765.5666677778888888888888 PP DUF702 102 tss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 ++s lP +v+++avf+cvrv+s+ddge+e+aY+++v+igG vfkG+LydqGl++ RWW15617.1 277 ATSshqdagasenLPGHVRAPAVFKCVRVTSIDDGEDEFAYHAVVKIGGRVFKGFLYDQGLDD 339 8777888888899*********************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 391 aa Download sequence
GVASGRRFPS DSGAFADWVA NPAAGGGGDD LCLGFNAGSS RGGGGGTGGV VWGGPSSLSA 60 VGGGARQGVN YGLPADMGMM VLASAASFHQ QCHHESLLSS SAAADQHPVF PLLAAASCVV 120 EDDNPTARAR PGGIHLWQPV LPQLPHLHAP NPNPNANLAN YLTKSVPTTD PSGILVGCGA 180 AAAGVGESTC QDCGNQAKKD CSHRRCRTCC KSRGFECSTH VKSTWVPASR RRERHVAAAS 240 SFASTSASKK PRLAASQPAT ASHTSTSNTT PPRSFDATSS HQDAGASENL PGHVRAPAVF 300 KCVRVTSIDD GEDEFAYHAV VKIGGRVFKG FLYDQGLDDG GHADDANDAI PNISELHLGN 360 RHGGFSSSPM LPSNVFGDGS GLIGGTNYGN Q

Sequence ? help Back to Top

Protein Sequence Length: 391 aa Download sequence

GVASGRRFPS DSGAFADWVA NPAAGGGGDD LCLGFNAGSS RGGGGGTGGV VWGGPSSLSA  60
VGGGARQGVN YGLPADMGMM VLASAASFHQ QCHHESLLSS SAAADQHPVF PLLAAASCVV  120
EDDNPTARAR PGGIHLWQPV LPQLPHLHAP NPNPNANLAN YLTKSVPTTD PSGILVGCGA  180
AAAGVGESTC QDCGNQAKKD CSHRRCRTCC KSRGFECSTH VKSTWVPASR RRERHVAAAS  240
SFASTSASKK PRLAASQPAT ASHTSTSNTT PPRSFDATSS HQDAGASENL PGHVRAPAVF  300
KCVRVTSIDD GEDEFAYHAV VKIGGRVFKG FLYDQGLDDG GHADDANDAI PNISELHLGN  360
RHGGFSSSPM LPSNVFGDGS GLIGGTNYGN Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	1e-54	SRS family protein