PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW15162.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 27352 Da PI: 5.7286 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 65 | 1.2e-20 | 98 | 144 | 14 | 59 |
--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES..--SS- CS WRKY 14 evkgsefprsYYrCtsagCpvkkkversaedpkvveitYeg..eHnhe 59 +vkgse+prsYY+Ct+++Cp kk+vers+ d++++ei+Y+g +Hnh+ RWW15162.1 98 SVKGSENPRSYYKCTYPNCPRKKQVERSS-DGQITEIVYKGaaTHNHP 144 69***************************.**********94457776 PP | |||||||
2 | WRKY | 35.9 | 1.4e-11 | 239 | 260 | 1 | 22 |
---SS-EEEEEEE--TT-SS-E CS WRKY 1 ldDgynWrKYGqKevkgsefpr 22 ldDgy+WrKYGqK+vkg+++pr RWW15162.1 239 LDDGYRWRKYGQKVVKGNPNPR 260 59*******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 260 aa Download sequence |
MSSSTSSSME TSAILKPPSF AFSELLAGAD GDGGREFSVS GGDSVPNFKS APPPSLAISR 60 PPLWSSSGFA IPAGLSPALL LDSPVLFSSS DVRISHSSVK GSENPRSYYK CTYPNCPRKK 120 QVERSSDGQI TEIVYKGAAT HNHPKPPSTG THSAAAVQAI QDAVPPEASF GGPSDAPGNS 180 SASFGDNGIE SSCRGGEELD ESEPDAKRWK AEGDREGVSA PGNREPRVVV QTQSDVDILD 240 DGYRWRKYGQ KVVKGNPNPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G38470.1 | 9e-49 | WRKY family protein |