PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW15094.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 217aa MW: 24339.7 Da PI: 9.7914 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.7 | 2.4e-16 | 77 | 112 | 1 | 34 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkg 34 C++Cg ++ Tp++Rrgp+g++tLCnaCGl+++ k+ RWW15094.1 77 CHHCGISSksTPMMRRGPEGPRTLCNACGLMWANKH 112 *****99999**********************9886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MYFGNWNLCR IHDIDLHIYR MLRNRGQFTS SKSKPEDATL SITNCEGIQR WGSIEGRPPS 60 SAVYAFNNVV SLKTFSCHHC GISSKSTPMM RRGPEGPRTL CNACGLMWAN KHILEHLYGT 120 PKNCHLSSVN FSILIIFYDF TGPAGYIEGP IKKSIFAYTQ WPFRRKRSGR SFSAKEFSFQ 180 KLERSHKMDL AVSNGASAPV AEHQPPNTAN DGNTASS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 4e-24 | GATA family protein |