PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW14548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 319aa MW: 35481.9 Da PI: 6.3149 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 91.8 | 1.1e-28 | 12 | 86 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ ew+fF++rd+ky++g r+nrat sgyWkatgkd+++ + + +l l+ktLvfy+grap g + dWvmheyrl RWW14548.1 12 KRDMEWFFFCPRDRKYPNGLRTNRATISGYWKATGKDRKIAC-EPSLCALRKTLVFYRGRAPGGYRMDWVMHEYRL 86 4678**************************************.8999***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MLVNVDKSFL PKRDMEWFFF CPRDRKYPNG LRTNRATISG YWKATGKDRK IACEPSLCAL 60 RKTLVFYRGR APGGYRMDWV MHEYRLCENL HEGSSNFVGG FALCRVIKRN VNGMKAGDLH 120 GECKAKRCHS SSDAFKFDPK GYSDKVLDSL EENSSRVTKV SHRSTDSIPI ASPDADREID 180 SAERGFWESQ LVSDATKTSL VDRGISSSTI TIGNTAEREA SLFPFIVNLI EEESVVVDGF 240 PGSGSLLAFP SPAHYMGLYV NAKDITYQSL ELDAPRDPSA SHSGTETWNS TALASVCRQA 300 GEGEDESLWL HEDNLVVVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17980.1 | 5e-47 | NAC family protein |