PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW13849.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 402aa MW: 42581.4 Da PI: 5.7626 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 78.7 | 6.7e-25 | 225 | 285 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDgy WrKYGqK++ +s fprsYYrC + +C++kkkv+++++dp+++e+tY + H+++ RWW13849.1 225 DDGYPWRKYGQKNILDSSFPRSYYRCNDKshyRCEAKKKVQKADDDPSTFEVTYCSGHTCQ 285 8*************************7666669**************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence |
MPSGLRAEAK TMDDILSQVF DACKLAGDLE SSLRLSAGPI DPGFLLLSCE DIAGAFSDAV 60 HVIRSRAPSS YTSHLLFGEA SGEGYVQAIH LLRQGDHAFC AGGPSANDMA LSGLPQLVPE 120 LQSTAAMGGS SYANTPDTGV DALVGGRGEA PVAPSGRRAD GSLPQRSCRK RWDPHPRDQK 180 LISSHLSSCC SPSTTAAATM FTQETNNDRD RVPVLRTGNM EMPPDDGYPW RKYGQKNILD 240 SSFPRSYYRC NDKSHYRCEA KKKVQKADDD PSTFEVTYCS GHTCQASPIP MLIPTLVPSG 300 SVNGDDDDGG NGNPQGAPLG LEAMQPVASL STPIHMQNWL EGNPRSIGAL LVAHSGVSSR 360 SSRQAAQVQG GRDVDCSVAD AMLNSARSGS SMDVIFSPAH GE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 6e-32 | WRKY family protein |