PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW13729.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MYB_related
Protein Properties Length: 295aa    MW: 32721.7 Da    PI: 6.247
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW13729.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding39.71.1e-121873146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..........TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..........kgRtlkqcksrwqk 46
                     rg+WT eEd ll ++++ +G g+W++ a++ g           +Rt++++k++w++
       RWW13729.1 18 RGPWTLEEDTLLMHYITCHGEGRWNLLAKCSGghssdlssqlMRRTDNEIKNYWRT 73
                     89****************************************99**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MSDKRGSSGK HEEMELRRGP WTLEEDTLLM HYITCHGEGR WNLLAKCSGG HSSDLSSQLM  60
RRTDNEIKNY WRTRVQKQAR QLKVDPNSTM FRDALLCYWT PRLREQIIGS SQTLRPVDAN  120
TNTTTATDQA QQVLQSCRSF ELPETESRSL STSSCSVVLS QLPEDLSEFP SGLSSDELSG  180
VTFDPFSSVC SMIDAYNFDT WDIAPVSASA PSHSASDRSN NVGSDGGEGL LRCHVTIPEL  240
RGESVRTSTV MRAVNLPTNL QELDISFRRL LSCGVGNLCV KSYSIIASAR MTVKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25340.26e-31MYB family protein