PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13659.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 349aa MW: 38616.1 Da PI: 7.5663

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13659.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.3	2.1e-11	135	177	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk + K++ +iL +++Y+k+L RWW13659.1 135 MAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 177 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MELDEHGFLE ELLALRRDAW DSDSFPAAMG DFFFPCDGGL DCFQQISPPA LAPSSFPPAF 60 DVTVEPNFDG LSEVCCPISG AYSAPAPEIQ SSSLDAGELG LARKVEPATF GLDGCVERKK 120 KKKKKLEGMP SKNLMAERRR RKRLNDRLSM LRSVVPKISK MDRTSILGDT IDYMKELLEK 180 VKRLQQEMDV GPQQPNLLST NEILGRNSPK VKIRSGRALC SVQAESHRQI TNNQSCLQFD 240 VERRESDTRI EMCCAAKPGL LLSTVNTLEA MGLEVQQCVV SCFSDFGLQA SCSEVSTPYS 300 LHCGHAKTVV HGGLPSTAGH RSEGGRRRRG HQASPLQQCR LWWKVSVDE

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MELDEHGFLE ELLALRRDAW DSDSFPAAMG DFFFPCDGGL DCFQQISPPA LAPSSFPPAF  60
DVTVEPNFDG LSEVCCPISG AYSAPAPEIQ SSSLDAGELG LARKVEPATF GLDGCVERKK  120
KKKKKLEGMP SKNLMAERRR RKRLNDRLSM LRSVVPKISK MDRTSILGDT IDYMKELLEK  180
VKRLQQEMDV GPQQPNLLST NEILGRNSPK VKIRSGRALC SVQAESHRQI TNNQSCLQFD  240
VERRESDTRI EMCCAAKPGL LLSTVNTLEA MGLEVQQCVV SCFSDFGLQA SCSEVSTPYS  300
LHCGHAKTVV HGGLPSTAGH RSEGGRRRRG HQASPLQQCR LWWKVSVDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	117	123	ERKKKKK
2	117	126	ERKKKKKKKL
3	118	124	RKKKKKK
4	118	141	RKKKKKKKLEGMPSKNLMAERRRR
5	119	125	RKKKKKK
6	119	142	RKKKKKKKLEGMPSKNLMAERRRR
7	120	143	RKKKKKKKLEGMPSKNLMAERRRR
8	121	144	RKKKKKKKLEGMPSKNLMAERRRR
9	122	145	RKKKKKKKLEGMPSKNLMAERRRR
10	123	146	RKKKKKKKLEGMPSKNLMAERRRR
11	137	146	ERKKKKKKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	1e-55	bHLH family protein