PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13474.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

NF-YC

Protein Properties

Length: 266aa MW: 28890 Da PI: 4.6625

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13474.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	162.5	6.2e-51	83	187	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++f ++q ie++tdfknh+lPlarikki+kadedv+misae+Pv+++kace+fileltlrsw+++eenkrrtl+k+di+aa+t+ d+fdflvdi+ RWW13474.1 83 QLQAFRADQmleIEETTDFKNHSLPLARIKKIMKADEDVRMISAEVPVVFAKACEMFILELTLRSWIQTEENKRRTLQKNDITAAITNVDMFDFLVDII 181 7899999987779************************************************************************************ PP NF-YC 97 prdelk 102 prdelk RWW13474.1 182 PRDELK 187 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MEQSMQPSSP VTGVVSGAAA QIAYAAPRIQ PAALVTGGPA VSGAIPPPAQ LTIAYPTNPA 60 NLASQHQIAY QQVSQFHHEL QQQLQAFRAD QMLEIEETTD FKNHSLPLAR IKKIMKADED 120 VRMISAEVPV VFAKACEMFI LELTLRSWIQ TEENKRRTLQ KNDITAAITN VDMFDFLVDI 180 IPRDELKDEG FGIIGAAFPA AVGAPANSEP YCFVSAPQVP SPAMMTGKLV DQTAAAALYA 240 VQQPHSVAYM WQPPPPQPAQ QVLDSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	162	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56170.1	6e-62	NF-YC family protein