PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW13404.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 291aa MW: 31252.2 Da PI: 6.6189

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW13404.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	26.5	1.4e-08	19	63	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C+ +e+ +++ C+ + lC +C +H+ H++ p RWW13404.1 19 VWMCEVCEQAPASVTCKADAAALCVTCDADIHSAnplalrHERAP 63 689*****************************6688888888776 PP
2	CCT	69.9	6.5e-24	221	265	1	45
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 Rea+++RY+eKrk+R+F K+irY+sRKa+Ae+RpR+KGrFvk++e RWW13404.1 221 REARVMRYREKRKNRRFVKTIRYASRKAYAETRPRIKGRFVKRSE 265 9*****************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence
MCGACDARVH GTGVRHERVW MCEVCEQAPA SVTCKADAAA LCVTCDADIH SANPLALRHE 60 RAPIVPFLEP LRPRSAAAGF LFGVAAADEE ASEAPSWLLP IPCANGKPMD HFFSDVDPYL 120 DLEYATSIDA RLQQADGVVP VDAKDTGRDG GAPPPGPFLP IDGAFELDFV GSKPSYSPYT 180 ADSLSHSFGV VPDGSGGVVK GARADATGPH SSGGGGRAAD REARVMRYRE KRKNRRFVKT 240 IRYASRKAYA ETRPRIKGRF VKRSEIEPEE VDRTYSPAFV ADPGYGVVPS F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	1e-68	CO-like family protein