PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW13095.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 318aa    MW: 35589.5 Da    PI: 11.6008
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW13095.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF95.13e-30254303251
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                 rien   rqvtfskRrng+lKKA+ELSvLCdaevavi+fs++gklye+ss
  RWW13095.1 254 RIENAASRQVTFSKRRNGLLKKAYELSVLCDAEVAVIVFSPRGKLYEFSS 303
                 8***********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSYLTRSCT HRQRKRSHWF GAPQKTSGIV PRTLATLSKL EQVLPLAACE TWNQSGHHLR  60
DRRFKASWTA IPGFPRSKKS TRIGNFDAPD TACRSEGILK RHFSSTATYG VATTGARRLG  120
SSLSSAPEGW RAVGARAADW SRPKWTSATE DPRQPPRVST DRRCAASFCA GRYDPRTKRA  180
HGPRVVPSKL SLLPSEPRTA DPPPVPSRSR VSLQHQTPEE APLSFVSRGR RHHKWEQEGR  240
KEIEMVRGKT EMRRIENAAS RQVTFSKRRN GLLKKAYELS VLCDAEVAVI VFSPRGKLYE  300
FSSSRSPPPP LSLSSFPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11880.17e-31MIKC_MADS family protein