PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW12965.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YC | ||||||||
Protein Properties | Length: 177aa MW: 20072.6 Da PI: 5.8603 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 171.8 | 7.4e-54 | 51 | 154 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie++tdf+nh+lPlarikki+kadedv+mi+aeaPv++++ace+filelt rsw haeenkrrtl+k+diaaa++rtd+fdfl+div RWW12965.1 51 QLQMFWADQcheIEQTTDFRNHSLPLARIKKIMKADEDVRMIAAEAPVVFARACEMFILELTHRSWAHAEENKRRTLQKNDIAAAISRTDVFDFLIDIV 149 89*****99999*************************************************************************************** PP NF-YC 97 prdel 101 pr+e RWW12965.1 150 PREEG 154 **985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MDQQPGHPAP PVIGVATGVP YAAAAASGTY QAYQNLYHQQ QQQQQQQQQQ QLQMFWADQC 60 HEIEQTTDFR NHSLPLARIK KIMKADEDVR MIAAEAPVVF ARACEMFILE LTHRSWAHAE 120 ENKRRTLQKN DIAAAISRTD VFDFLIDIVP REEGKEDVAH ALGAPPSDPL SYYYVPK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 124 | 130 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56170.1 | 5e-63 | NF-YC family protein |