PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW12622.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 271aa    MW: 29846.2 Da    PI: 9.3025
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW12622.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.52e-24121169250
                 ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                 rien  +rq++f+kRr+g+lKKA+ELSvLCda++ +i+fs +gklye +
  RWW12622.1 121 RIENPVQRQISFCKRRAGLLKKAKELSVLCDADIGIIVFSAHGKLYELA 169
                 8*********************************************965 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MMEQTAATIH VGVNSNFISL AAADDSPPPS AIAILAEISL PLKPNAEGKM QRTFQSGEVG  60
MGRQTRPTAG RVCACQKKVT LHTVTRARAR AQLSSATASK LVQTSGRLSP TMARGKLQLR  120
RIENPVQRQI SFCKRRAGLL KKAKELSVLC DADIGIIVFS AHGKLYELAT KGYPHTATCI  180
FHYCFIAPFH ESEREISMLK QEISLLHNSM RYSTDVHVSR RDFCAYDSGR TVWIRKAPSD  240
MDGTHSRYED ADHVPGDSVP EEQGTSFPVC V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.17e-34MIKC_MADS family protein