PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW12165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 233aa MW: 25649.4 Da PI: 6.0449 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 60.6 | 2e-19 | 162 | 195 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 C +Cgt +Tp+WR+gp+g+++LCnaCG++y++ + RWW12165.1 162 CGHCGTRETPQWRSGPSGSSELCNACGIRYKSGR 195 9******************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MVRRTLFFDL DLGESLEPDM DDPADEPLYV PDDPLDSIRF LFDPLDESIV ASWKPEVTES 60 SVAEATEVLL PDSHTAVPST ARRPRSRPQP RAQHLDPVTS GPDGVGGARR GSCSLEPSST 120 VPADVGDARG RCRRPRWARE PLAAAHDPIA RGENVGNGER ICGHCGTRET PQWRSGPSGS 180 SELCNACGIR YKSGRLFPEY RPSTTATSID SSNYSNRHST IVTIRQRKEN ERR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51080.1 | 7e-26 | GATA family protein |