PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW12090.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 468aa MW: 50914.8 Da PI: 8.491

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW12090.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.4	1.2e-05	28	50	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k F r nL+ H r H RWW12090.1 28 FTCEVCNKGFQREQNLQLHRRGH 50 89*******************88 PP
2	zf-C2H2	12	0.00066	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H + + RWW12090.1 104 WKCDKCSKRYAVQSDWKAHSKIC 126 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
IVRSILITDT DAEVIALSPK TLMATNRFTC EVCNKGFQRE QNLQLHRRGH NLPWKLKKKN 60 PDEVRRRVYL CPEPTCAHHD PSRALGDLTG IKKHFCRKHG EKRWKCDKCS KRYAVQSDWK 120 AHSKICGTRE YRCDCGTLFS RRDSFVTHRA FCDALAQESA RLPTDAHAIG GHLYPNRGIT 180 SHFSSLAQPS NDLLLLRGNG GADQIDATTS RQAQPYHPPS FYFAGGSNQG LDEDPQLLQI 240 KPFRGMMQLQ DLQTVADAAS SSSAAAANAF NIGFFCGSDS TNALNSAGRG TEPIPLFAGD 300 LTSNNHINDD ANMSSLYNPC MQPQVSATAL LQKATTWSGG NGSSLLRGFG GSYDSYTSGV 360 NVGSRQSSGA HVENHFHDIM DSLANQQAAG FGGFNPGLGN MDEDGLHHSN LSAGGIGGSD 420 RSTRDFLGVG SMMRRSMLGG VQERDQQLGI GKRSMDAEMK STRGGRLQ

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

IVRSILITDT DAEVIALSPK TLMATNRFTC EVCNKGFQRE QNLQLHRRGH NLPWKLKKKN  60
PDEVRRRVYL CPEPTCAHHD PSRALGDLTG IKKHFCRKHG EKRWKCDKCS KRYAVQSDWK  120
AHSKICGTRE YRCDCGTLFS RRDSFVTHRA FCDALAQESA RLPTDAHAIG GHLYPNRGIT  180
SHFSSLAQPS NDLLLLRGNG GADQIDATTS RQAQPYHPPS FYFAGGSNQG LDEDPQLLQI  240
KPFRGMMQLQ DLQTVADAAS SSSAAAANAF NIGFFCGSDS TNALNSAGRG TEPIPLFAGD  300
LTSNNHINDD ANMSSLYNPC MQPQVSATAL LQKATTWSGG NGSSLLRGFG GSYDSYTSGV  360
NVGSRQSSGA HVENHFHDIM DSLANQQAAG FGGFNPGLGN MDEDGLHHSN LSAGGIGGSD  420
RSTRDFLGVG SMMRRSMLGG VQERDQQLGI GKRSMDAEMK STRGGRLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02080.1	1e-106	C2H2 family protein