PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11875.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GRF

Protein Properties

Length: 566aa MW: 61087.2 Da PI: 8.1106

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11875.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.9	2e-24	204	248	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e+ RWW11875.1 204 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEN 248 79*****************************************97 PP
2	QLQ	59	1.4e-20	144	180	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+ +L++Q+l+yKyL+an+P+P+ Ll +i++ RWW11875.1 144 GPFTPSQWLELEHQALIYKYLVANVPIPATLLIPIRR 180 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MDALVGASSE GGGSLCSSSS TTSLAPSDTE LGRQGGLRGS ILQKHDRPAA EPEDCDWRSL 60 KMARPEELVT TPIKAAPFLL RSNSHPLFPD GEQMLSFSSA SPPSSTQCYL GNEDIFVTFV 120 FPVSGSSPGS SNASMQGVMA RLRGPFTPSQ WLELEHQALI YKYLVANVPI PATLLIPIRR 180 ILGASGFPPL SARSFGSGYS GNADPEPGRC RRTDGKKWRC SRDAVADQKY CERHMNRGRH 240 RSRKHVENQT GNATKAMPTT ASSQSAAAVL GGASTNTLTI SMQQSKSLQS NTTDPCPLQF 300 NSKGDQNACS LNSKSLSTAS PVNQKPDSDV LPPVSDQHNP FEETSSRAEF GLVSPDSLLN 360 PPSILFSNNI DFMATPKLNE WQIQSHPFNF IDDWPKTQSN RSTITWPEVD KTQSDRTQLS 420 MSIPKAYSDF SSSSCNHDKP ALSLPKLSRE YDAIRMPSWQ ANWKLIPWEA SMAGPLGEVL 480 TSTKSTPKDQ SKNRSSSSLN LLTDGWDSRL ESSPAGVLHK TSFGSLSNST GSSPSAENSK 540 THDRIGSLCS GLLGSTVVKA PTIQSL

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MDALVGASSE GGGSLCSSSS TTSLAPSDTE LGRQGGLRGS ILQKHDRPAA EPEDCDWRSL  60
KMARPEELVT TPIKAAPFLL RSNSHPLFPD GEQMLSFSSA SPPSSTQCYL GNEDIFVTFV  120
FPVSGSSPGS SNASMQGVMA RLRGPFTPSQ WLELEHQALI YKYLVANVPI PATLLIPIRR  180
ILGASGFPPL SARSFGSGYS GNADPEPGRC RRTDGKKWRC SRDAVADQKY CERHMNRGRH  240
RSRKHVENQT GNATKAMPTT ASSQSAAAVL GGASTNTLTI SMQQSKSLQS NTTDPCPLQF  300
NSKGDQNACS LNSKSLSTAS PVNQKPDSDV LPPVSDQHNP FEETSSRAEF GLVSPDSLLN  360
PPSILFSNNI DFMATPKLNE WQIQSHPFNF IDDWPKTQSN RSTITWPEVD KTQSDRTQLS  420
MSIPKAYSDF SSSSCNHDKP ALSLPKLSRE YDAIRMPSWQ ANWKLIPWEA SMAGPLGEVL  480
TSTKSTPKDQ SKNRSSSSLN LLTDGWDSRL ESSPAGVLHK TSFGSLSNST GSSPSAENSK  540
THDRIGSLCS GLLGSTVVKA PTIQSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-60	GRF family protein