PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW11871.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family MIKC_MADS
Protein Properties Length: 116aa    MW: 13288.7 Da    PI: 11.1458
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW11871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF931.5e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk nrqvtf+kRrng+lKKA+ELS+LCdaeva i+fss+g l+e++s
  RWW11871.1  9 KRIENKVNRQVTFAKRRNGLLKKAYELSILCDAEVAAIVFSSRGSLFEFCS 59
                79***********************************************96 PP

2K-box14.31.7e-06811126899
       K-box  68 kKnellleqieelqkkekelqeenkaLrkkle 99 
                 k ++++++q+ +l++ e++l e nk+Lr+k+ 
  RWW11871.1  81 KVTQVVIDQLTNLKREEEMLLESNKTLRRKVR 112
                 5689*************************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MGRGRVELKR IENKVNRQVT FAKRRNGLLK KAYELSILCD AEVAAIVFSS RGSLFEFCSS  60
SSSLPLIVVL IFKIINAFMR KVTQVVIDQL TNLKREEEML LESNKTLRRK VRQKGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.39e-27MIKC_MADS family protein