PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW11871.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 116aa MW: 13288.7 Da PI: 11.1458 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 93 | 1.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk nrqvtf+kRrng+lKKA+ELS+LCdaeva i+fss+g l+e++s RWW11871.1 9 KRIENKVNRQVTFAKRRNGLLKKAYELSILCDAEVAAIVFSSRGSLFEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 14.3 | 1.7e-06 | 81 | 112 | 68 | 99 |
K-box 68 kKnellleqieelqkkekelqeenkaLrkkle 99 k ++++++q+ +l++ e++l e nk+Lr+k+ RWW11871.1 81 KVTQVVIDQLTNLKREEEMLLESNKTLRRKVR 112 5689*************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MGRGRVELKR IENKVNRQVT FAKRRNGLLK KAYELSILCD AEVAAIVFSS RGSLFEFCSS 60 SSSLPLIVVL IFKIINAFMR KVTQVVIDQL TNLKREEEML LESNKTLRRK VRQKGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G24260.3 | 9e-27 | MIKC_MADS family protein |