PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW11854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | GATA | ||||||||
Protein Properties | Length: 203aa MW: 22605.8 Da PI: 7.2714 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 46.9 | 3.6e-15 | 157 | 190 | 1 | 32 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 C+nCg ++ Tp +Rrgp g+++LCnaCGl+++ RWW11854.1 157 CQNCGISEkmTPAMRRGPAGPRSLCNACGLMWAN 190 ********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence |
MTSDPNALRD HQMYRVDGPA TADGEGRHDA ETVDVTSEPP PPDQDGHVAE AVDSAAPLMS 60 MTSNQLTLLY QGEVYVFDSV TPEKVQAVLL LLGGCEVPSN TTLPDAQDEK GYDDILRRAN 120 IPAKRIASLI RFREKRKERN FDKKIRYNVR KEVALRCQNC GISEKMTPAM RRGPAGPRSL 180 CNACGLMWAN KVYTNCFCLY KVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 1e-50 | GATA family protein |