PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW11565.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 221aa    MW: 25597.8 Da    PI: 9.3847
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW11565.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.71.5e-181151343
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                i n+s r+ tf kR++g++KK +ELS+LCd+++++ii++++
  RWW11565.1 11 IVNHSARKATFKKRKKGLMKKVSELSTLCDVKACMIIYGPD 51
                7899***********************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MARKKVKLEW IVNHSARKAT FKKRKKGLMK KVSELSTLCD VKACMIIYGP DEPHADVWPS  60
VPDAMRVLAR LKRLPETEQS KKMMNQEALM RQRIRKLQEQ LQKQDKENRE LETTLLMHQC  120
LSGRSLHDVA MEDVTALVWM TEMNMKKVRE GIEDAALKSE EKVKEEKPVV NDKGKTPMAA  180
AAKEELPGQD WFAGAMDLSE LMISRNDDHK NNWLNTYYPM D
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLEWIVNHSARKATFKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.17e-34M-type_MADS family protein