PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11515.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 474aa MW: 53326.3 Da PI: 6.2375

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11515.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	22.2	2.5e-07	277	297	9	29
HHHHHHHHHHHHHHHHCTSCC CS HLH 9 ErrRRdriNsafeeLrellPk 29 ErrRR+++N++f Lr+l+P+ RWW11515.1 277 ERRRREKLNEKFLALRSLVPT 297 9*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 474 aa Download sequence
MSCLKILEDV DLVKQITSFF WELPNPFCSE QSMSSPQLAE RGEGIRCPDI DNGIDNSIPL 60 EEHNLITDHR TPLESDPTTH FPFPIHSYLP TEQTESVKVE ELHQNICEEP DSCSPDDSSN 120 ECCLTHQLED LFGADGLNGM SRTHSMQLVD DEFSNGLLHG SLSSNEFATM SFVNAQRAVP 180 SATREPTRHQ MLGGLQEGNY GKHISLDLDG DDSHYAETVA TILRTSKQVN SVLCFLKVSF 240 RSSFVVWRRG FNTPKSFIST PQKLLKKILM DRAWWSERRR REKLNEKFLA LRSLVPTGGK 300 VIGLVFLDHF DRRRAHELES GTAVLGTTDR RKNPDVAERT SDNYLGKEIT NEWKPLGNKR 360 KACDIDEGEA EHHFVLSKHG PVHVTVRVKE REVLVELRCP WRECLLLEVV ESMSNLHLDP 420 ISVQSSTVDG MLALTVKSKV RATPKPRPLP PALPKKQQRG VAGDDKAVAS ESDK

Sequence ? help Back to Top

Protein Sequence Length: 474 aa Download sequence

MSCLKILEDV DLVKQITSFF WELPNPFCSE QSMSSPQLAE RGEGIRCPDI DNGIDNSIPL  60
EEHNLITDHR TPLESDPTTH FPFPIHSYLP TEQTESVKVE ELHQNICEEP DSCSPDDSSN  120
ECCLTHQLED LFGADGLNGM SRTHSMQLVD DEFSNGLLHG SLSSNEFATM SFVNAQRAVP  180
SATREPTRHQ MLGGLQEGNY GKHISLDLDG DDSHYAETVA TILRTSKQVN SVLCFLKVSF  240
RSSFVVWRRG FNTPKSFIST PQKLLKKILM DRAWWSERRR REKLNEKFLA LRSLVPTGGK  300
VIGLVFLDHF DRRRAHELES GTAVLGTTDR RKNPDVAERT SDNYLGKEIT NEWKPLGNKR  360
KACDIDEGEA EHHFVLSKHG PVHVTVRVKE REVLVELRCP WRECLLLEVV ESMSNLHLDP  420
ISVQSSTVDG MLALTVKSKV RATPKPRPLP PALPKKQQRG VAGDDKAVAS ESDK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	277	282	ERRRRE
2	278	283	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G63650.1	1e-29	bHLH family protein