PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW11334.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

C2H2

Protein Properties

Length: 417aa MW: 45336.6 Da PI: 7.8083

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW11334.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.3	0.00052	257	279	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H RWW11334.1 257 FSCNYCRRKFYSSQALGGHQNAH 279 89*****************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MRVRNPTHLD PTRSNSRREV DCSPPPPSPS KPQKPRFFPG KAEIVAAATA AYKRFPILSP 60 QRGGRWGSDE AVTGLDRSLI ERNQFICDDV ATVGGRSRGA RTAVGERDAW RSAMERRFST 120 SPPPAFDASC INRPLTHLGR SRSSGRARGP LTLPLTVWVD GKCVNGVSQP FSLEEEEEVD 180 QYSSSWRLME EEEEKRGEKE EERGHSTQQL FQQEESKADT DAIDGSSSSS LPVLELNLIG 240 SVDSANTEPP EEEPRVFSCN YCRRKFYSSQ ALGGHQNAHK RERNLAKSGG AAVAFGDHAG 300 ASGNGYRVPV NLANLPLQGL YAGRPLGIQV HSMIHKPYTG APTSAAATAL IYGRRAWLQP 360 PMGDRQPAIG RLLTEEFYGT GRAQVAAKFD EAAAAVGGKP CVSGGEELPE LDLSLKL

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MRVRNPTHLD PTRSNSRREV DCSPPPPSPS KPQKPRFFPG KAEIVAAATA AYKRFPILSP  60
QRGGRWGSDE AVTGLDRSLI ERNQFICDDV ATVGGRSRGA RTAVGERDAW RSAMERRFST  120
SPPPAFDASC INRPLTHLGR SRSSGRARGP LTLPLTVWVD GKCVNGVSQP FSLEEEEEVD  180
QYSSSWRLME EEEEKRGEKE EERGHSTQQL FQQEESKADT DAIDGSSSSS LPVLELNLIG  240
SVDSANTEPP EEEPRVFSCN YCRRKFYSSQ ALGGHQNAHK RERNLAKSGG AAVAFGDHAG  300
ASGNGYRVPV NLANLPLQGL YAGRPLGIQV HSMIHKPYTG APTSAAATAL IYGRRAWLQP  360
PMGDRQPAIG RLLTEEFYGT GRAQVAAKFD EAAAAVGGKP CVSGGEELPE LDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	5e-29	C2H2 family protein