PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW10378.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 375aa    MW: 41161.7 Da    PI: 10.8082
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW10378.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.61.4e-221862145
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                krie++  rqv fskRr+g++KKA+ELSvLC+ae a+i+fs+ gk
  RWW10378.1 18 KRIESEEARQVCFSKRRAGLFKKANELSVLCGAELALIVFSPAGK 62
                79*****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MMPRKRKTSM GRQKIEIKRI ESEEARQVCF SKRRAGLFKK ANELSVLCGA ELALIVFSPA  60
GKPFSFGHPS VDSIVDRFLS RGPTPPPHPH PLALHGAAAS ADRRMLVPAP ASAVHELDRE  120
YSELAERLEA ERRRREALEA ALRGQRGAAA HLLNANVEEL GLAELERLQG ALESLRWDAA  180
RRVDQLVIEA QTRSLVLAGD AGGSGFVSTA EGTIVIPPHE KKRKGLPAPS PFFPTYLPPA  240
KHSHRRYPLP RPPHPSTISS FLCISTTVAA PPTSAAGQRR LCCRTFLPAP AAGQRRLSRN  300
LLPPTVAVLP HASRRHLCRR LAPPQPLPSS FPPFLLQQLH ALYLTPRRPR CLPGSHFFFL  360
AEPYCSPEPA APPCC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.14e-30M-type_MADS family protein