PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10192.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

CO-like

Protein Properties

Length: 367aa MW: 39287.1 Da PI: 6.8678

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10192.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	21.1	6.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ ++e++ +++C+++ lC +C + H+ H++ RWW10192.1 4 LCDFCGEQRSIIYCRSDAASLCLSCDRNVHSAnalsrrHSR 44 7*****************************65677777766 PP
2	zf-B_box	25.1	3.6e-08	46	90	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41 C++++e+++ + C + ++ lC dC ++H g H++++ RWW10192.1 46 LLCDRCSEQPAVIRCAEESVSLCLDCDWNGHGGatavssgHKRET 90 57*****************************66999999999876 PP
3	CCT	66.5	7.6e-23	310	353	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R+ a++RYkeK+k R FeKkirY+sRKa+A+ R RvKGrFvk+ RWW10192.1 310 RDSAVMRYKEKKKARMFEKKIRYASRKAMADGRRRVKGRFVKAG 353 899**************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MSHLCDFCGE QRSIIYCRSD AASLCLSCDR NVHSANALSR RHSRTLLCDR CSEQPAVIRC 60 AEESVSLCLD CDWNGHGGAT AVSSGHKRET INCYLGCPSA AEFSRIWPFF QELPEIAGSD 120 CEQGVGLMTI NESSVSNCWA SPENSTLDVP GAGKLEDLEA VDKSNALIGS SSGSAICPMS 180 CTADLTAGAV DSTTPKVHLS FEFTLFSTVH SQEHSAQASS AGQVKSMQAT CSNAVFAGSV 240 MSNPGKNADS SKFFPARQAC ASLSLSFSGL TGESSVGDYQ DCGVSSVLLM GEPPVFAAGL 300 ENSSLPRASR DSAVMRYKEK KKARMFEKKI RYASRKAMAD GRRRVKGRFV KAGEAYDYDP 360 LAQTRSF

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MSHLCDFCGE QRSIIYCRSD AASLCLSCDR NVHSANALSR RHSRTLLCDR CSEQPAVIRC  60
AEESVSLCLD CDWNGHGGAT AVSSGHKRET INCYLGCPSA AEFSRIWPFF QELPEIAGSD  120
CEQGVGLMTI NESSVSNCWA SPENSTLDVP GAGKLEDLEA VDKSNALIGS SSGSAICPMS  180
CTADLTAGAV DSTTPKVHLS FEFTLFSTVH SQEHSAQASS AGQVKSMQAT CSNAVFAGSV  240
MSNPGKNADS SKFFPARQAC ASLSLSFSGL TGESSVGDYQ DCGVSSVLLM GEPPVFAAGL  300
ENSSLPRASR DSAVMRYKEK KKARMFEKKI RYASRKAMAD GRRRVKGRFV KAGEAYDYDP  360
LAQTRSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07650.2	1e-89	CO-like family protein