PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW10022.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

LBD

Protein Properties

Length: 162aa MW: 18082.8 Da PI: 7.3022

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW10022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	141.9	2.1e-44	6	105	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +Ca+Ck+lrr+C+kdC++apyfp+++p+kfa+vhk+FGasnv+k+l++lp ++r da+ slvyeA ar+rdPvyG+vg i+ lq+q++ql+ +la++++ RWW10022.1 6 PCASCKLLRRRCTKDCIFAPYFPSDDPHKFAIVHKIFGASNVSKMLQELPVHQRADAVGSLVYEATARMRDPVYGCVGAISYLQNQVSQLQMQLAVAQT 104 7**********************************************************************************************9998 PP DUF260 100 e 100 e RWW10022.1 105 E 105 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 162 aa Download sequence
MGGNSPCASC KLLRRRCTKD CIFAPYFPSD DPHKFAIVHK IFGASNVSKM LQELPVHQRA 60 DAVGSLVYEA TARMRDPVYG CVGAISYLQN QVSQLQMQLA VAQTEILCIQ MQQEPPLAEQ 120 KMEADDKSFV INNNLTAMPQ LLNYASSSNV AQDPLKREFL WT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30130.1	3e-78	LBD family protein