PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09788.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 363aa MW: 39037.8 Da PI: 5.7247

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09788.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	40.2	7.7e-13	152	189	1	39
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkq 39 +g+W++eEd +l ++v ++G ++W++Iar ++ gR+++ RWW09788.1 152 KGPWSPEEDAILSRLVSKFGARNWSLIARGIP-GRSGNL 189 79****************************.*985 PP
2	Myb_DNA-binding	49.9	7.4e-16	194	234	5	47
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T eEd +++ a++ +G++ W++Iar + gRt++ +k++w++ RWW09788.1 194 TDEEDHIIIAAHAIHGNK-WASIARLLE-GRTDNAIKNHWNST 234 99**************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MATVGIKVTS LSHILSKTFP AWPLRIQNEP NGADGELGHG AQEWDGGVIE DIVLSTMVNL 60 RSLLSSVSAR WTAEPRLRGR KLTEAPVMEI EPETVVDPAP STASPSSPVV IVDGQAAGSA 120 SAAAGEEGIG DGVVRDEHPS GGGAAATEDR VKGPWSPEED AILSRLVSKF GARNWSLIAR 180 GIPGRSGNLV VSVTDEEDHI IIAAHAIHGN KWASIARLLE GRTDNAIKNH WNSTLRRRCN 240 EPERCKTTAS DALKDAAIEK TKGSLDESPS FSYSNSFKSM EARETSLREN AFDDSGEVVI 300 IRDEEAPKPE IKDPPYLYRP VARVSAFSPY NRMPGRSAGP EVSRGDKLDR PLYKVFKPGG 360 GIC

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MATVGIKVTS LSHILSKTFP AWPLRIQNEP NGADGELGHG AQEWDGGVIE DIVLSTMVNL  60
RSLLSSVSAR WTAEPRLRGR KLTEAPVMEI EPETVVDPAP STASPSSPVV IVDGQAAGSA  120
SAAAGEEGIG DGVVRDEHPS GGGAAATEDR VKGPWSPEED AILSRLVSKF GARNWSLIAR  180
GIPGRSGNLV VSVTDEEDHI IIAAHAIHGN KWASIARLLE GRTDNAIKNH WNSTLRRRCN  240
EPERCKTTAS DALKDAAIEK TKGSLDESPS FSYSNSFKSM EARETSLREN AFDDSGEVVI  300
IRDEEAPKPE IKDPPYLYRP VARVSAFSPY NRMPGRSAGP EVSRGDKLDR PLYKVFKPGG  360
GIC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09230.1	4e-38	MYB family protein