PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW09531.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 262aa MW: 29846.6 Da PI: 6.5056 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 23.7 | 9.8e-08 | 139 | 182 | 21 | 59 |
-EEEEEE-ST...T---EEEEEE-SS..STTEEEEEEES--SS- CS WRKY 21 prsYYrCtsa...gCpvkkkversae..dpkvveitYegeHnhe 59 +rsY+rC ++ +Cp++k v++ ++ dp ++++Y+ +H+++ RWW09531.1 139 SRSYHRCIYHkdqDCPATKTVQKVDNdaDPPEFTVVYNMQHRCR 182 7*******998889********987612677899*******986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MEEHSNLLVS TSTDLSHCDH HQAIKEINEA HELTRQLRAL LLPSLTAGSL AQLAREILDN 60 ITKSCSLTVF LLQSGGHDHQ ASKQLNGQGG RRPMLDGRKR RKELAVPNTQ GSAKYILYNI 120 TRERRYLLLD STFPSFCLSR SYHRCIYHKD QDCPATKTVQ KVDNDADPPE FTVVYNMQHR 180 CRSSDSHIPF VMESAEASLV KKKQSRADTP SNGDPQMTHL LLSDEISNVP LTPEQWNLDN 240 DLDSVMSFFE FADEDPFYKL WM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 98 | 103 | RKRRKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 6e-09 | WRKY family protein |