PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW09202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | MYB | ||||||||
Protein Properties | Length: 257aa MW: 28292.4 Da PI: 6.1588 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 46.4 | 9.3e-15 | 5 | 52 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W+++Ed++l ++ ++G +W++++++ g++R +k+c++rw +yl RWW09202.1 5 KGLWSPDEDQRLRAYILKHGLSCWSAVPAEAGLRRNGKSCRLRWINYL 52 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.9 | 4.9e-18 | 58 | 103 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+e +++ ++lG++ W+ Ia +++ gRt++++k++w++yl RWW09202.1 58 RGNFSAEEEETVINLQAKLGNR-WSQIATHLP-GRTDNEVKNYWNSYL 103 89********************.*********.*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MNSKKGLWSP DEDQRLRAYI LKHGLSCWSA VPAEAGLRRN GKSCRLRWIN YLRPGLKRGN 60 FSAEEEETVI NLQAKLGNRW SQIATHLPGR TDNEVKNYWN SYLKKRVTKA QNSDPHGSAT 120 SSSDCTNQGP VKHEEEPSSQ MISPATHVDT GGFSPKLAAL NGLPRVLFGD CLQANGGDSL 180 DDLGEVMSNP WHNTNSHGEV CGQATDGTTN GYGGGASMSG EMQAQPEALL QIQENGFFDI 240 LFPGLVYDRM DFCDREF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25560.1 | 6e-54 | MYB family protein |