PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09190.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 389aa MW: 40496.1 Da PI: 5.2964

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09190.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.5	8.5e-07	362	386	7	30
HHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 7 erErrRRdriNsafeeLrellPk.a 30 ++ErrRR+++N+++ Lr+++Pk + RWW09190.1 362 MAERRRRKKLNDRLYMLRSVVPKiS 386 79********************944 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MLSRIHGVVW AEDGGDEEDA ASWTRANTPS ASGEAMGESK DELRLPSFKS MLDDDDDWYL 60 GGGATSNPVT SPAAHHPFQV FQAHRDAAFP SNPKPHEALL LPAVDDLDQS QPFFPAKSAL 120 ASLFGAVCSN PFDAGLDLGC DAPGFLPAPQ VSNTPVLMNR GGGGGGGGIL GFAGMVAGEQ 180 LGCPHLSSGA EFAGGRLLLP SENCDGSISG VAVGFDNFDS SPFLNRSKLL RPLEMFPPVG 240 AQPTLFQKRA ASALRQNPSA AGKKGGFLGL WGSEGAGQGN GSKSALEELN EKKRKGNEDD 300 EGSVDASGLN YDTDEVAAEN AKDEDNAKGG GGGSNSIANS TVTAGGGDQK GKKKGLPAKN 360 LMAERRRRKK LNDRLYMLRS VVPKISKVK

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MLSRIHGVVW AEDGGDEEDA ASWTRANTPS ASGEAMGESK DELRLPSFKS MLDDDDDWYL  60
GGGATSNPVT SPAAHHPFQV FQAHRDAAFP SNPKPHEALL LPAVDDLDQS QPFFPAKSAL  120
ASLFGAVCSN PFDAGLDLGC DAPGFLPAPQ VSNTPVLMNR GGGGGGGGIL GFAGMVAGEQ  180
LGCPHLSSGA EFAGGRLLLP SENCDGSISG VAVGFDNFDS SPFLNRSKLL RPLEMFPPVG  240
AQPTLFQKRA ASALRQNPSA AGKKGGFLGL WGSEGAGQGN GSKSALEELN EKKRKGNEDD  300
EGSVDASGLN YDTDEVAAEN AKDEDNAKGG GGGSNSIANS TVTAGGGDQK GKKKGLPAKN  360
LMAERRRRKK LNDRLYMLRS VVPKISKVK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	352	370	KKKGLPAKNLMAERRRRKK
2	364	371	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-28	bHLH family protein