PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW09005.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

GATA

Protein Properties

Length: 566aa MW: 63702.7 Da PI: 7.8824

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW09005.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.9	2.1e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ RWW09005.1 7 CHHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41 **************55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 566 aa Download sequence
MGKNGPCHHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLTDYTPLHA RESFDLENLG 60 TFKIESISFK PKEQKLRKKK RSSNPLESLQ EMRYSDQNFC KIVEGNTSNR SSTGSAISVS 120 ESCAHVGTID ANDMTGPAKS NVWESLVPSK KRTSATRPKV SPVEKLTKDL YSIFYEQQSS 180 NLSGSSEEDL IYESGTPLGY TEIGYGGLLI RHPNSEYIED ESEASSLPVA KPYIINERYA 240 RLMSFPLDTE SKGKTFSDSG THKLKNLTQH MAQENAMSDK TFGENLKILQ DKDSPLLSAD 300 LNDIINFEIF IKFLANEEKQ LLMKYLPSID TVRSPESLRT MFRSPQFCET LSYFQQLLQE 360 GTFDLSFSEA NVEDCRTLKG LILLDLKKFR WVEYYEKLKI KGRKGKAIGS KFPGIDNLVS 420 IKRPHDSRNQ NSSDLKATTK NPKRACKHVV SSSPSNNLHH LESSDTRSKL TNKDGFEKNK 480 CDHFRHRNFQ ASPLDICSMS VPLQYTADSA DHDLLLNVPS NSSFPEAELL HCHPWRQKSI 540 QTGSLAESVV AEIEESSSRY QSSFLE

Sequence ? help Back to Top

Protein Sequence Length: 566 aa Download sequence

MGKNGPCHHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLTDYTPLHA RESFDLENLG  60
TFKIESISFK PKEQKLRKKK RSSNPLESLQ EMRYSDQNFC KIVEGNTSNR SSTGSAISVS  120
ESCAHVGTID ANDMTGPAKS NVWESLVPSK KRTSATRPKV SPVEKLTKDL YSIFYEQQSS  180
NLSGSSEEDL IYESGTPLGY TEIGYGGLLI RHPNSEYIED ESEASSLPVA KPYIINERYA  240
RLMSFPLDTE SKGKTFSDSG THKLKNLTQH MAQENAMSDK TFGENLKILQ DKDSPLLSAD  300
LNDIINFEIF IKFLANEEKQ LLMKYLPSID TVRSPESLRT MFRSPQFCET LSYFQQLLQE  360
GTFDLSFSEA NVEDCRTLKG LILLDLKKFR WVEYYEKLKI KGRKGKAIGS KFPGIDNLVS  420
IKRPHDSRNQ NSSDLKATTK NPKRACKHVV SSSPSNNLHH LESSDTRSKL TNKDGFEKNK  480
CDHFRHRNFQ ASPLDICSMS VPLQYTADSA DHDLLLNVPS NSSFPEAELL HCHPWRQKSI  540
QTGSLAESVV AEIEESSSRY QSSFLE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-103	GATA family protein