PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08890.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

bHLH

Protein Properties

Length: 513aa MW: 57610 Da PI: 11.1333

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08890.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	18.4	4e-06	275	300	6	30
HHHHHHHHHHHHHHHHHHHCTSCC.C CS HLH 6 nerErrRRdriNsafeeLrellPk.a 30 +++Er RR +i +++ +L+el+P+ + RWW08890.1 275 SIAERVRRTKISERIRKLQELVPNmD 300 689********************966 PP

Sequence ? help Back to Top
Protein Sequence Length: 513 aa Download sequence
MNPGLLRYRS APSCLLVEPC ENSLRATLLS AETENKGGTV GCQRSPQFRQ PPPVVPSSEM 60 VSSQQRPAFS SALPTMYHHC QQRLQTHNMP NHCLAEISHR AVGSMATEMQ QIENGAGRNS 120 TNRTRHSSSP AGLFSPLDVD AGGRHKCWPR KTTENWIIRL NRCSFDVRVG YGKMMGLDGF 180 GNGDLPPMSD TANRLKDQMS FLPRQTSLMS KIPELGSEEV QNGGMTMKHV SGLRHHLSLP 240 KTSSEMAAVE NFLQFQDAVP CKIRAKRGCA THPRSIAERV RRTKISERIR KLQELVPNMD 300 KHDSIRSRVC KVIHVVFLVK EVAVKSGREV VCGVDLRRAR GTHPGEANRT ENTVPTDERS 360 GPTVASNRRR RRGPCWWKDG VPPKPQRKRK RQLSRPRGFL CLFRRYTWRW APSAHSSRVR 420 TMLMGYQDPT VVIGDHQLCT KPCARSKSTE STAAIARRRH PGPPDPGAVP RHAKDTDYRF 480 SPIARSIPKR IWHWDETLGA RPLSTRGKSC SLA

Sequence ? help Back to Top

Protein Sequence Length: 513 aa Download sequence

MNPGLLRYRS APSCLLVEPC ENSLRATLLS AETENKGGTV GCQRSPQFRQ PPPVVPSSEM  60
VSSQQRPAFS SALPTMYHHC QQRLQTHNMP NHCLAEISHR AVGSMATEMQ QIENGAGRNS  120
TNRTRHSSSP AGLFSPLDVD AGGRHKCWPR KTTENWIIRL NRCSFDVRVG YGKMMGLDGF  180
GNGDLPPMSD TANRLKDQMS FLPRQTSLMS KIPELGSEEV QNGGMTMKHV SGLRHHLSLP  240
KTSSEMAAVE NFLQFQDAVP CKIRAKRGCA THPRSIAERV RRTKISERIR KLQELVPNMD  300
KHDSIRSRVC KVIHVVFLVK EVAVKSGREV VCGVDLRRAR GTHPGEANRT ENTVPTDERS  360
GPTVASNRRR RRGPCWWKDG VPPKPQRKRK RQLSRPRGFL CLFRRYTWRW APSAHSSRVR  420
TMLMGYQDPT VVIGDHQLCT KPCARSKSTE STAAIARRRH PGPPDPGAVP RHAKDTDYRF  480
SPIARSIPKR IWHWDETLGA RPLSTRGKSC SLA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	368	390	RRRRRGPCWWKDGVPPKPQRKRK
2	369	391	RRRRRGPCWWKDGVPPKPQRKRK
3	370	392	RRRRRGPCWWKDGVPPKPQRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	1e-31	bHLH family protein