PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW08827.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family CO-like
Protein Properties Length: 330aa    MW: 35791.5 Da    PI: 6.8291
Description CO-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW08827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.21.4e-071858337
    zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg.......H 37
                 r+C+ ++   + l+C  +  +lC +C    H g       H
  RWW08827.1 18 GRRCDSCKGAAALLYCGADAAYLCGECDARVH-GasplalhH 58
                689******99*****************9999.547777755 PP
2zf-B_box28.33.6e-0961106342
    zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 
                  ++C+ +e+ ++ + C+ +   lC  C   +H+       H+++p+
  RWW08827.1  61 VWVCEVCEQAPAAFTCKADAAALCVACDADIHSAnplarrHERIPV 106
                 689*****************************66889999998885 PP
3CCT67.34.2e-23257301145
         CCT   1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqae 45 
                 Rea+++RY+eKrk+R+FeK++rY+sRKa+Ae+RpR+KGrF+k++e
  RWW08827.1 257 REARVMRYREKRKSRRFEKTVRYASRKAYAETRPRIKGRFAKRSE 301
                 9*****************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MASVVAEGKG GYWAGLEGRR CDSCKGAAAL LYCGADAAYL CGECDARVHG ASPLALHHER  60
VWVCEVCEQA PAAFTCKADA AALCVACDAD IHSANPLARR HERIPVVPFI EPLKPTTTSA  120
AAFLLGSEKD EEKENDAISW LLPKPGHTHP KGLTGAPEIK STEFYFSDVN PYLDLEYTTK  180
MDGGFYQADS VVPVHAKASG FDGGAPPPPS FLPTDAPIEL DCAPSMPSYS SYTTHSMSHS  240
AAVVPDGIGN WAAPTDREAR VMRYREKRKS RRFEKTVRYA SRKAYAETRP RIKGRFAKRS  300
EIEAKVDRLY PSSVAAALMV DAVYDVVPSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57660.12e-54CO-like family protein