PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW08658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | Whirly | ||||||||
Protein Properties | Length: 158aa MW: 17622.3 Da PI: 10.3678 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 52 | 1.5e-16 | 91 | 157 | 1 | 54 |
Whirly 1 svyktkaalkvkavrptfeald.............sgnlklkraGglllelanataerkydWekkqs 54 s+yk+kaal+v++++p+f ld sg+ k++++G++ll++a+a+a+r+ydW++kq+ RWW08658.1 91 SIYKGKAALTVEPRAPEFAPLDfvkftvvdllvvqSGAYKVSKEGFILLQFAPAAATRQYDWSRKQV 157 7***************99765333333333444449*****************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MYSPSCPRPV RPYPHLLPAS SAPLNSSFSC PRTLTLGRKK KAQLFVRCRR SDYFDQQRLF 60 ARPPSPPQDE PSSLASQPPG AQPSRVFVGY SIYKGKAALT VEPRAPEFAP LDFVKFTVVD 120 LLVVQSGAYK VSKEGFILLQ FAPAAATRQY DWSRKQVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 9e-32 | Whirly family protein |