PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW08557.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 462aa MW: 51672.3 Da PI: 7.2095

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW08557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33.5	9.5e-11	16	47	1	32
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g+WT+eEd++l+ ++k++G g+W++ ++ g RWW08557.1 16 KGSWTPEEDLRLIAYIKKHGHGNWRALPKLAG 47 799***********************999887 PP
2	Myb_DNA-binding	32.9	1.5e-10	102	143	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ ++++ +G W++Ia++++ gRt++++k+ w+++l RWW08557.1 102 RGNFTKEEEDTIIKL---HG--VWSKIASHLP-GRTDNEIKNVWNTHL 143 89*******9876...67..6*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MGGGRAPCCA KVGLNKGSWT PEEDLRLIAY IKKHGHGNWR ALPKLAGLVS SLPRPFPLRI 60 YVSELTWTFF SFFLGLVGKG LLRCGKSCRL RWINYLRPDI KRGNFTKEEE DTIIKLHGVW 120 SKIASHLPGR TDNEIKNVWN THLKKRLVFK EHNNPEEALS SSSSSTLPSC SDQGDNKSDE 180 ERNNPCLHSH DSSLEVIEIP IEPMDLWSML DEEPRGSTMI ISSASSTQLS AMNHGVDQEV 240 VPDVLIDPDI WSMIQDEDAC SLTLETLQPS NSSAVGEESN REGNDSEWLE YLEEELGLRE 300 AAAVEDQGSP VRGAGEQPHA FVSFVLEIPD RKHLYEPRSE PNQSGVGLRG GHVANPIKQS 360 RPAGNAKWLG RPCPGMYDPC RRFDTESRLL TRLNPTVRTG RHAHRRWSRL VKERTKERRV 420 EHWKTMKLGR SRESVTPSIN QVRPGPPADA PTGNAAALAP EP

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MGGGRAPCCA KVGLNKGSWT PEEDLRLIAY IKKHGHGNWR ALPKLAGLVS SLPRPFPLRI  60
YVSELTWTFF SFFLGLVGKG LLRCGKSCRL RWINYLRPDI KRGNFTKEEE DTIIKLHGVW  120
SKIASHLPGR TDNEIKNVWN THLKKRLVFK EHNNPEEALS SSSSSTLPSC SDQGDNKSDE  180
ERNNPCLHSH DSSLEVIEIP IEPMDLWSML DEEPRGSTMI ISSASSTQLS AMNHGVDQEV  240
VPDVLIDPDI WSMIQDEDAC SLTLETLQPS NSSAVGEESN REGNDSEWLE YLEEELGLRE  300
AAAVEDQGSP VRGAGEQPHA FVSFVLEIPD RKHLYEPRSE PNQSGVGLRG GHVANPIKQS  360
RPAGNAKWLG RPCPGMYDPC RRFDTESRLL TRLNPTVRTG RHAHRRWSRL VKERTKERRV  420
EHWKTMKLGR SRESVTPSIN QVRPGPPADA PTGNAAALAP EP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16490.1	7e-57	MYB family protein