PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW08194.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | HB-other | ||||||||
Protein Properties | Length: 177aa MW: 19447.6 Da PI: 9.6171 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.2 | 2.4e-17 | 124 | 177 | 3 | 52 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 k ++t+eq+e+Le+++ ++++ps +r++L +++ +++ +q+kvWFqNrR RWW08194.1 124 KYVRYTPEQVEALERVYSECPKPSSLKRQQLIRECpilsNIEPKQIKVWFQNRR 177 5679*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MFSVLIRPGR RWRCSARSKI LRIPKAKRFL FALLSDGRLG EAGEEAIPLC CSGPLLRGGD 60 VSPAAEEPEE VGGGGSLGVG DRVDWGKIGF LRGSLEGAEM AMVVSGKEMG KAQQAAALAM 120 ESGKYVRYTP EQVEALERVY SECPKPSSLK RQQLIRECPI LSNIEPKQIK VWFQNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34710.1 | 1e-33 | HD-ZIP family protein |