PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW07981.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

TCP

Protein Properties

Length: 426aa MW: 45961.5 Da PI: 8.8415

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW07981.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	135	6.5e-42	56	194	2	130
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt......ssssa...sec...eaesssssasnsssg 88 g+kdrhsk++T++g+RdRRvRls+++a++f+dLqd+LG+d++sk+ieWL+++a +ai el+ + + + +e+ +++ + s +++++++ RWW07981.1 56 SGGKDRHSKVYTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAIEWLIKAAAAAINELPPLdgfpkpP---HpsgEEMmeiSPDVEPSYNQHHQQQ 151 689***********************************************************9886542...2333333455666666777777777 PP TCP 89 kaaksaakskksqksaasalnlak.esrakarararertrekm 130 ++++++ +s+ s++s+ s+l+l++ esr kar+rarer +++ RWW07981.1 152 HQSSKSGCSSTSETSKGSVLSLSRsESRIKARERARERAAKDR 194 7888888999*************************988765 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MMCNGSQAAK IGRKQLAGDD EEDGKKRKGE GGADASRIGS WQHYPSSRIF RVSRASGGKD 60 RHSKVYTAKG LRDRRVRLSV STAIQFYDLQ DRLGYDQPSK AIEWLIKAAA AAINELPPLD 120 GFPKPPHPSG EEMMEISPDV EPSYNQHHQQ QHQSSKSGCS STSETSKGSV LSLSRSESRI 180 KARERARERA AKDRDDSGPT VASHHQNQNP NPQTPSLTTT FTELLTGGGS VSNNSDVTAA 240 ASGQNSDRSC IQKQISTADY FGQAGLFAQP QKSHQLPSSF SSQSHFGNSS PMGMLPFNIA 300 LTGHHPEMQQ FFLQDHVFPV SAVAASGDYN LNFSISSEIA GFSRGTLQSN SPAQMPQQHH 360 RGHNNLPRLS STVDGSNPQL FFGSAAGSAA AATSAENQFP AGMDGGLQLC YGDDYRHSDL 420 KGKGKR

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MMCNGSQAAK IGRKQLAGDD EEDGKKRKGE GGADASRIGS WQHYPSSRIF RVSRASGGKD  60
RHSKVYTAKG LRDRRVRLSV STAIQFYDLQ DRLGYDQPSK AIEWLIKAAA AAINELPPLD  120
GFPKPPHPSG EEMMEISPDV EPSYNQHHQQ QHQSSKSGCS STSETSKGSV LSLSRSESRI  180
KARERARERA AKDRDDSGPT VASHHQNQNP NPQTPSLTTT FTELLTGGGS VSNNSDVTAA  240
ASGQNSDRSC IQKQISTADY FGQAGLFAQP QKSHQLPSSF SSQSHFGNSS PMGMLPFNIA  300
LTGHHPEMQQ FFLQDHVFPV SAVAASGDYN LNFSISSEIA GFSRGTLQSN SPAQMPQQHH  360
RGHNNLPRLS STVDGSNPQL FFGSAAGSAA AATSAENQFP AGMDGGLQLC YGDDYRHSDL  420
KGKGKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18390.1	5e-37	TCP family protein