PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW07465.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family M-type_MADS
Protein Properties Length: 301aa    MW: 33418.3 Da    PI: 9.5312
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW07465.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.82.1e-161964348
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                i +k    ++fskR+ng++ KA+ LS+LC+++v v+ifs+tg+ + 
  RWW07465.1 19 IADKNALFISFSKRKNGVFTKASDLSTLCGTDVVVVIFSPTGRAFS 64
                556666678*********************************8765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MLKRKKTSKG KQKIELRKIA DKNALFISFS KRKNGVFTKA SDLSTLCGTD VVVVIFSPTG  60
RAFSFGCPTV EPIMERFLSG SLFPSFGSQE EQIHRRRSIH EKNRQVMELS RQVDAARAMN  120
AKAKAELKVA CQELEWLYEW DKVTLQQLDK LEESLEVLKS RVQNRLQKLQ PSVRASPSNE  180
VVIVDHAGAS GAGGLVMGDP RWQGFEAVLN MGLLPITDYH MDPTASSSNA FTVFGLPGSS  240
GSAGFGPIDP GWSGIQAILN PVLSANSARM VNPYEPLIHQ PNPTEKTMDD YKNINYMYPH  300
F
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1333KRKKTSKGKQKIELRKIADKNALFISFSKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-21M-type_MADS family protein