PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW07117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | WRKY | ||||||||
Protein Properties | Length: 134aa MW: 15112.4 Da PI: 11.0374 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 34.2 | 5.1e-11 | 27 | 46 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D+++WrKYGqK++kgs++pr RWW07117.1 27 DEFSWRKYGQKPIKGSPYPR 46 9******************9 PP | |||||||
2 | WRKY | 53.5 | 4.7e-17 | 79 | 117 | 22 | 59 |
EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YY+C++ gCp++k+ver+ +dp+++++tYegeH+h+ RWW07117.1 79 RGYYKCSTLrGCPARKHVERAPDDPTMLIVTYEGEHRHT 117 99****9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 134 aa Download sequence |
MQSRKSRVKR TIRVPAVSSK LADIPPDEFS WRKYGQKPIK GSPYPRYLRP FLPLICPTDF 60 HQTAAVRSNP RSSRRGRLRG YYKCSTLRGC PARKHVERAP DDPTMLIVTY EGEHRHTPNA 120 ATAAAPEPVT ASAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31550.1 | 3e-40 | WRKY family protein |