PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | RWW06850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 334aa MW: 36032.4 Da PI: 7.1568 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 55.8 | 6.2e-18 | 253 | 287 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+ Tp+WR gp g ktLCnaCG+++++ +l RWW06850.1 253 CTHCGAQRTPQWRAGPLGAKTLCNACGVRFKSGRL 287 *******************************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 334 aa Download sequence |
MGQQQPSRGI WEEDVALALE SGSLWVEEFA VDELLNLEFM DEEKEGGGAQ EGEVRDFAEH 60 KKAEVFDSNT SSCSASSATS SPSFEPALAL TAIGLPVSRP AHDAEELEWV SRVMDDSLWA 120 PQPQQDDTAT QTEDRPAKGP SSVSPAVCIL STQAMVPVKA KRSKRSRSAA PVVAWSLSGP 180 LLFVESSTES TTTSSSSSSV SSRWPPSISS CLTHDHPSAA GDQSLFLCDK QKPKKRGRKP 240 KPASSATAGE RRCTHCGAQR TPQWRAGPLG AKTLCNACGV RFKSGRLLPE YRPACSPTFV 300 NHIHSNCHRK VIEMRRKKEA ELPSPAAASP VSYL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G66320.2 | 5e-39 | GATA family protein |