PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW06635.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

RAV

Protein Properties

Length: 359aa MW: 39958.1 Da PI: 10.0493

Description

RAV family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW06635.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.8	1.3e-13	65	113	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+ykGV + +grW A+I++ r r++lg+fg + eAa+a++ a+++++g RWW06635.1 65 SQYKGVVPQP-NGRWGAQIYE------RhHRVWLGTFGDEAEAARAYDVAAQRFRG 113 78**9888.8*****......44******99***********98 PP
2	B3	88.3	6.3e-28	188	291	1	97
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+kv tpsdv+k++rlv+pk+ ae++ +++ +++ l +ed g++W+++++y+ +s+++vltkGW++Fv++++Lk+gD+v F ++ e++l RWW06635.1 188 FDKVVTPSDVGKLNRLVIPKQQAEKYfpleggSSVASKGVLLNFEDaGGGNVWRFRYSYWSSSQSFVLTKGWSRFVREKNLKAGDVVSFWRSTGPEKQL 286 89**************************9877778999**5555*************************************9876677777 PP EEEEE CS B3 93 vvkvf 97 ++ ++ RWW06635.1 287 FIDWR 291 77775 PP

Sequence ? help Back to Top
Protein Sequence Length: 359 aa Download sequence
MEVSCVDEAP THSARWQRKT TTPPPPHHHA GEEALQRMGS GVSAVLDPTP ESGTEAVSRK 60 LSSSSQYKGV VPQPNGRWGA QIYERHHRVW LGTFGDEAEA ARAYDVAAQR FRGRDAITNF 120 KPLSDSVHDE AFEFSFLGAH SKAEIVDMLR KHTYHDELRQ CKRAQGGGRV VSRRTTPSSP 180 RSARLILFDK VVTPSDVGKL NRLVIPKQQA EKYFPLEGGS SVASKGVLLN FEDAGGGNVW 240 RFRYSYWSSS QSFVLTKGWS RFVREKNLKA GDVVSFWRST GPEKQLFIDW RTDVISSFRT 300 ITPPPPPPPP LVNPLRVVKL FGVDISELLP VSGGGDRKRG RETELLFPPS TCSHILESL

Sequence ? help Back to Top

Protein Sequence Length: 359 aa Download sequence

MEVSCVDEAP THSARWQRKT TTPPPPHHHA GEEALQRMGS GVSAVLDPTP ESGTEAVSRK  60
LSSSSQYKGV VPQPNGRWGA QIYERHHRVW LGTFGDEAEA ARAYDVAAQR FRGRDAITNF  120
KPLSDSVHDE AFEFSFLGAH SKAEIVDMLR KHTYHDELRQ CKRAQGGGRV VSRRTTPSSP  180
RSARLILFDK VVTPSDVGKL NRLVIPKQQA EKYFPLEGGS SVASKGVLLN FEDAGGGNVW  240
RFRYSYWSSS QSFVLTKGWS RFVREKNLKA GDVVSFWRST GPEKQLFIDW RTDVISSFRT  300
ITPPPPPPPP LVNPLRVVKL FGVDISELLP VSGGGDRKRG RETELLFPPS TCSHILESL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68840.2	1e-107	RAV family protein