PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW06578.1
Organism
Ensete ventricosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family BBR-BPC
Protein Properties Length: 345aa    MW: 38379.6 Da    PI: 10.0069
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW06578.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind354.13e-10853451301
   GAGA_bind   1 mdddgsre..rnkg.yye........paaslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                 md+ g+r   r k+ +y+        p+++lken++++l  ++aerd++++er+la+sekkaa+ erdma+lqrd+a+aern+a+verdn++++l++++
  RWW06578.1   5 MDEGGQRGngRYKTdQYKpshaqwmaPQHHLKENQTIKL--IMAERDKALQERDLAISEKKAALVERDMAYLQRDAAIAERNNAIVERDNAIASLEYAR 101
                 888888655777777888888888776679998887777..589***************************************************9987 PP

   GAGA_bind  89 nsla.....salpvgvqvlsgtksidslqqlse.....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkk 177
                 ++ +       +p+g + +++t + ++ q+l++     +ql d + ++++  + e +pi+ a e+  ++ k k++ +++k +++  kk++k++++  ++
  RWW06578.1 102 ENGMstscgPGCPSGHHGSKHTYHYHHQQHLQHihppsQQLVDAS-GQKKDAQGEMFPISAASETGVKALKAKRGGKGTKVQSSSLKKPRKSKRDGGDN 199
                 665556666667778888888888888888777889866666554.5688888999*****99999999999988888888888888887776666666 PP

   GAGA_bind 178 vkkesad.er.....................skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaR 254
                  +k+ ++ +r                     + +e+ks+dl+ln+v++D++t+PvPvCsCtG+ rqCYkWGnGGWqSaCCt+t+S+yPLPv++++r+aR
  RWW06578.1 200 LSKQVTSaKRagewrgevgvgedltkqvsmaKCHEWKSQDLGLNQVAYDDTTMPVPVCSCTGKYRQCYKWGNGGWQSACCTMTLSMYPLPVMPNKRHAR 298
                 66666553448999***************98889***************************************************************** PP

   GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                 ++grKmS++af+klL++La+eG+dls pvDL++hWAkHGtn+++ti+
  RWW06578.1 299 VGGRKMSGSAFRKLLSRLASEGHDLSLPVDLREHWAKHGTNRYITIK 345
                 **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
LVIIMDEGGQ RGNGRYKTDQ YKPSHAQWMA PQHHLKENQT IKLIMAERDK ALQERDLAIS  60
EKKAALVERD MAYLQRDAAI AERNNAIVER DNAIASLEYA RENGMSTSCG PGCPSGHHGS  120
KHTYHYHHQQ HLQHIHPPSQ QLVDASGQKK DAQGEMFPIS AASETGVKAL KAKRGGKGTK  180
VQSSSLKKPR KSKRDGGDNL SKQVTSAKRA GEWRGEVGVG EDLTKQVSMA KCHEWKSQDL  240
GLNQVAYDDT TMPVPVCSCT GKYRQCYKWG NGGWQSACCT MTLSMYPLPV MPNKRHARVG  300
GRKMSGSAFR KLLSRLASEG HDLSLPVDLR EHWAKHGTNR YITIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-105BBR-BPC family protein