PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW06537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NF-YC | ||||||||
Protein Properties | Length: 106aa MW: 11771.9 Da PI: 11.8734 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 104.4 | 7.3e-33 | 22 | 103 | 19 | 99 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 h+lPlarik+i+k + edv+misaeaPv++skacel+i l r+w a krrtl+k d+aaavt+td+fdfl +v ++ RWW06537.1 22 HSLPLARIKRIMKrSSEDVRMISAEAPVVFSKACELLIGVLMRRAWAAAFRRKRRTLRKEDVAAAVTNTDVFDFLAQVVLQQ 103 99**********94579************************************************************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MRQAGAYSSM LVGGVSGRTG PHSLPLARIK RIMKRSSEDV RMISAEAPVV FSKACELLIG 60 VLMRRAWAAA FRRKRRTLRK EDVAAAVTNT DVFDFLAQVV LQQQPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-26 | NF-YC family protein |