PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05939.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | C2H2 | ||||||||
Protein Properties | Length: 180aa MW: 18888.4 Da PI: 8.7894 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0015 | 57 | 79 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F++ L H +H RWW05939.1 57 FECKTCNRQFPSFQALGGHRASH 79 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MDVLKDTKRY RLGGGGGGGG GEQNDSVNMA NVLMLLSQGG GGGDGGAEKR DHSGRVFECK 60 TCNRQFPSFQ ALGGHRASHK KPRLGGDGHG HGQMQGGAAK PRVHECSVCG LEFAIGQALG 120 GHMRRHRATA EGFGHVLGEK PPRDHRGMLL DLNLPPLETD PKLGLGLEIV DKTPMVGCGH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 5e-32 | C2H2 family protein |