PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW05035.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | NAC | ||||||||
Protein Properties | Length: 169aa MW: 18767.5 Da PI: 8.612 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 130 | 1.7e-40 | 5 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...........kvkaeekewyfFskrdkkyatgkrknra.......... 77 lppGfrFhPtdeel+++yL +kv++ + + +i++vd++k+ePwdLp + +v ++ +++ ra RWW05035.1 5 LPPGFRFHPTDEELITYYLSRKVTELGFAT-AAIADVDLNKCEPWDLPgTnlsrvpfppvaCV----------NPSVPVVEESVSGDRAlqgrlawgrk 92 79*************************999.78***************435555555544322..........22222222222222222222333333 PP NAM 78 ..tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 t++gyWk+tgkdke+++ g lvg+kktLvfykgrapkgekt Wvmheyrl RWW05035.1 93 saTDAGYWKTTGKDKEIFH-CGVLVGMKKTLVFYKGRAPKGEKTGWVMHEYRL 144 3499***************.9******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
MEESLPPGFR FHPTDEELIT YYLSRKVTEL GFATAAIADV DLNKCEPWDL PGTNLSRVPF 60 PPVACVNPSV PVVEESVSGD RALQGRLAWG RKSATDAGYW KTTGKDKEIF HCGVLVGMKK 120 TLVFYKGRAP KGEKTGWVMH EYRLHTGFLY NRTKVFPTQP IGTAVTCSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18400.1 | 9e-58 | NAC family protein |