PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWW05026.1

Organism

Ensete ventricosum

Taxonomic ID

4639

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete

Family

MYB

Protein Properties

Length: 274aa MW: 30056.4 Da PI: 8.2906

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWW05026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.4	5.9e-17	57	102	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v q+G+ +W++Ia+++ gR++k+c++rw++ RWW05026.1 57 RGHWRPAEDAKLKELVSQYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 102 899***************************.*********996 PP
2	Myb_DNA-binding	54.5	2.7e-17	109	152	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++ E+e+l+ a++++G++ W++Iar ++ gRt++ +k++w+ RWW05026.1 109 RNAFSEVEEERLLAAHRLYGNK-WALIARLFP-GRTDNAVKNHWHV 152 789*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MAPNEVNLRC ADEGFFPPVA SPFPAGDDKS NSQGREEEGG DGSPHGNEQQ QHRLCARGHW 60 RPAEDAKLKE LVSQYGPQNW NLIAEKLEGR SGKSCRLRWF NQLDPKINRN AFSEVEEERL 120 LAAHRLYGNK WALIARLFPG RTDNAVKNHW HVIMARKQRE QSNAYRRSRR PSVSPSCAPL 180 PQSLPNNNNN NNACSGEWWA AAGKGCVARF GDSGGAFSPR VPKMLLPGVD EPGCTGSASE 240 EVSVAYYMSN GLPRGESTHG SGLAFIDFLG VGAT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69560.1	7e-68	MYB family protein