PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWW04673.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
Family LBD
Protein Properties Length: 267aa    MW: 28904.8 Da    PI: 6.0397
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWW04673.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26028.44.6e-09861285799
      DUF260  57 amsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 
                 +++sl+ eA+ r+ +P+yGa+g++ ++++ql+q+++e++l ++
  RWW04673.1  86 IFRSLLHEACDRIINPIYGAAGLLCNGTWQLCQAAVEAVLEGA 128
                 689*********************************9988765 PP

Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MNTRSSERLN DEFLLLLLLL FPRKHPETMT SAFVEGGRRN QTPVGGISYE GRSMDVKRGL  60
PLPLFLSNSP DHPLLLPSPH LITLPIFRSL LHEACDRIIN PIYGAAGLLC NGTWQLCQAA  120
VEAVLEGAPI VRAASASASA SAPPGLRTYD IWHVTKTAAN SRDRFKRTGF ATKSPGLPRP  180
VQMESRRASS YESDDTPDDG RTLPSESTTV EATALSDGEP DDKAESREED AGVGLDLILG  240
LVLAVGASQP AVQPYMRPVD LRLRLPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G02550.11e-22LBD family protein