PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | RWW04673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Ensete
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Family | LBD | ||||||||
Protein Properties | Length: 267aa MW: 28904.8 Da PI: 6.0397 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 28.4 | 4.6e-09 | 86 | 128 | 57 | 99 |
DUF260 57 amsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +++sl+ eA+ r+ +P+yGa+g++ ++++ql+q+++e++l ++ RWW04673.1 86 IFRSLLHEACDRIINPIYGAAGLLCNGTWQLCQAAVEAVLEGA 128 689*********************************9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 267 aa Download sequence |
MNTRSSERLN DEFLLLLLLL FPRKHPETMT SAFVEGGRRN QTPVGGISYE GRSMDVKRGL 60 PLPLFLSNSP DHPLLLPSPH LITLPIFRSL LHEACDRIIN PIYGAAGLLC NGTWQLCQAA 120 VEAVLEGAPI VRAASASASA SAPPGLRTYD IWHVTKTAAN SRDRFKRTGF ATKSPGLPRP 180 VQMESRRASS YESDDTPDDG RTLPSESTTV EATALSDGEP DDKAESREED AGVGLDLILG 240 LVLAVGASQP AVQPYMRPVD LRLRLPA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02550.1 | 1e-22 | LBD family protein |